Package de.uni_mannheim.informatik.dws.melt.matching_data

Class TrackRepository.Largebio.V2015

java.lang.Object

de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Largebio.V2015

Enclosing class:

TrackRepository.Largebio

public static class TrackRepository.Largebio.V2015
extends Object

2015 version of Large Biomedical Ontologies.

Field Summary

Fields

Modifier and Type	Field	Description
static Track	FMA_NCI_SMALL	Task 1: FMA-NCI small fragments: This task consists of matching two (relatively) small fragments of FMA and NCI.
static Track	FMA_NCI_SMALL_FLAGGED	Task 1: FMA-NCI small fragments: This task consists of matching two (relatively) small fragments of FMA and NCI.
static Track	FMA_NCI_WHOLE	Task 2: FMA-NCI whole ontologies.
static Track	FMA_NCI_WHOLE_FLAGGED	Task 2: FMA-NCI whole ontologies.
static Track	FMA_SNOMED_SMALL	Task 3: FMA-SNOMED small fragments.
static Track	FMA_SNOMED_SMALL_FLAGGED	Task 3: FMA-SNOMED small fragments.
static Track	FMA_SNOMED_WHOLE	Task 4: FMA whole ontology.
static Track	FMA_SNOMED_WHOLE_FLAGGED	Task 4: FMA whole ontology.
static Track	SNOMED_NCI_SMALL	Task 5: SNOMED-NCI small fragments.
static Track	SNOMED_NCI_SMALL_FLAGGED	Task 5: SNOMED-NCI small fragments.
static Track	SNOMED_NCI_WHOLE	Task 6: NCI whole ontology with SNOMED large fragment.
static Track	SNOMED_NCI_WHOLE_FLAGGED	Task 6: NCI whole ontology with SNOMED large fragment.

Constructor Summary

Constructors

Constructor	Description
V2015()

Method Summary

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

FMA_NCI_SMALL

public static Track FMA_NCI_SMALL

Task 1: FMA-NCI small fragments: This task consists of matching two (relatively) small fragments of FMA and NCI. The FMA fragment contains 3,696 classes (5% of FMA), while the NCI fragment contains 6,488 classes (10% of NCI). Together 10,184 classes

FMA_NCI_SMALL_FLAGGED

public static Track FMA_NCI_SMALL_FLAGGED

Task 1: FMA-NCI small fragments: This task consists of matching two (relatively) small fragments of FMA and NCI. The FMA fragment contains 3,696 classes (5% of FMA), while the NCI fragment contains 6,488 classes (10% of NCI). Together 10,184 classes With incoherence-causing mappings in the alignment flagged as "?" (unknown).

FMA_NCI_WHOLE

public static Track FMA_NCI_WHOLE

Task 2: FMA-NCI whole ontologies. This task consists of matching the whole FMA and NCI ontologies, which contains 78,989 and 66,724 classes, respectively. Together 145,713 classes

FMA_NCI_WHOLE_FLAGGED

public static Track FMA_NCI_WHOLE_FLAGGED

Task 2: FMA-NCI whole ontologies. This task consists of matching the whole FMA and NCI ontologies, which contains 78,989 and 66,724 classes, respectively. Together 145,713 classes With incoherence-causing mappings in the alignment flagged as "?" (unknown).

FMA_SNOMED_SMALL

public static Track FMA_SNOMED_SMALL

Task 3: FMA-SNOMED small fragments. This task consists of matching two (relatively) small fragments of FMA and SNOMED. The FMA fragment contains 10,157 classes (13% of FMA), while the SNOMED fragment contains 13,412 classes (5% of SNOMED). Together 23,569 classes

FMA_SNOMED_SMALL_FLAGGED

public static Track FMA_SNOMED_SMALL_FLAGGED

Task 3: FMA-SNOMED small fragments. This task consists of matching two (relatively) small fragments of FMA and SNOMED. The FMA fragment contains 10,157 classes (13% of FMA), while the SNOMED fragment contains 13,412 classes (5% of SNOMED). Together 23,569 classes With incoherence-causing mappings in the alignment flagged as "?" (unknown).

FMA_SNOMED_WHOLE

public static Track FMA_SNOMED_WHOLE

Task 4: FMA whole ontology. This task consists of matching the whole FMA that contains 78,989 classes with a large SNOMED fragment that contains 122,464 classes (40% of SNOMED). Together 201,453 classes.

FMA_SNOMED_WHOLE_FLAGGED

public static Track FMA_SNOMED_WHOLE_FLAGGED

Task 4: FMA whole ontology. This task consists of matching the whole FMA that contains 78,989 classes with a large SNOMED fragment that contains 122,464 classes (40% of SNOMED). Together 201,453 classes. With incoherence-causing mappings in the alignment flagged as "?" (unknown).

SNOMED_NCI_SMALL

public static Track SNOMED_NCI_SMALL

Task 5: SNOMED-NCI small fragments. This task consists of matching two (relatively) small fragments of SNOMED and NCI. The SNOMED fragment contains 51,128 classes (17% of SNOMED), while the NCI fragment contains 23,958 classes (36% of NCI). Together 75,086 classes.

SNOMED_NCI_SMALL_FLAGGED

public static Track SNOMED_NCI_SMALL_FLAGGED

Task 5: SNOMED-NCI small fragments. This task consists of matching two (relatively) small fragments of SNOMED and NCI. The SNOMED fragment contains 51,128 classes (17% of SNOMED), while the NCI fragment contains 23,958 classes (36% of NCI). Together 75,086 classes. With incoherence-causing mappings in the alignment flagged as "?" (unknown).

SNOMED_NCI_WHOLE

public static Track SNOMED_NCI_WHOLE

Task 6: NCI whole ontology with SNOMED large fragment. This task consists of matching the whole NCI that contains 66,724 classes with a large SNOMED fragment that contains 122,464 classes (40% of SNOMED). Together 189,188 classes.

SNOMED_NCI_WHOLE_FLAGGED

public static Track SNOMED_NCI_WHOLE_FLAGGED

Task 6: NCI whole ontology with SNOMED large fragment. This task consists of matching the whole NCI that contains 66,724 classes with a large SNOMED fragment that contains 122,464 classes (40% of SNOMED). Together 189,188 classes. With incoherence-causing mappings in the alignment flagged as "?" (unknown).

Constructor Details

V2015

public V2015()