Package de.uni_mannheim.informatik.dws.melt.matching_data

Class TrackRepository.Phenotype.V2017

java.lang.Object

de.uni_mannheim.informatik.dws.melt.matching_data.TrackRepository.Phenotype.V2017

Enclosing class:

TrackRepository.Phenotype

public static class TrackRepository.Phenotype.V2017
extends Object

2017 version of DiseasePhenotype Track (HP_MP and DOID_ORDO also used in 2018)

Field Summary

Fields

Modifier and Type	Field	Description
static Track	DOID_ORDO	This task consists of matching the DOID (38,240 classes) and ORDO (13,504) ontologies.
static Track	HP_MESH	Deprecated.
static Track	HP_MP	This task consists of matching the HP (31,034 classes) and MP (30,273 entities) ontologies.
static Track	HP_OMIM	Deprecated.

Constructor Summary

Constructors

Constructor	Description
V2017()

Method Summary

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

HP_MP

public static Track HP_MP

This task consists of matching the HP (31,034 classes) and MP (30,273 entities) ontologies. The BioPortal-based alignment contains 696 mappings.

DOID_ORDO

public static Track DOID_ORDO

This task consists of matching the DOID (38,240 classes) and ORDO (13,504) ontologies. The BioPortal-based alignment contains 1,237 mappings.

HP_MESH

public static Track HP_MESH

Deprecated.

This task consists of matching the HP (31,034 classes) and MESH (305,349) ontologies. The BioPortal-based alignment contains 2,466 mappings. Not used in 2018.

HP_OMIM

public static Track HP_OMIM

Deprecated.

This task consists of matching the HP (31,034 classes) and OMIM (93,048) ontologies. The BioPortal-based alignment contains 3,768 mappings. Not used in 2018.

Constructor Details

V2017

public V2017()